An 'intrinsic manifold' is defined here as such an atlas, in a suitable category of elementary spaces: open euclidean spaces, or trivial bundles, or trivial vector bundles, and so on.
This uniform approach allows us to move from one basis to another: for instance, the elementary tangent bundle of an open Euclidean space is automatically extended to the tangent bundle of any differentiable manifold. The same holds for tensor calculus.
Technically, the goal of this book is to treat these structures as 'symmetric enriched categories' over a suitable basis, generally an ordered category of partial mappings.
This approach to gluing structures is related to Ehresmann's one, based on inductive pseudogroups and inductive categories. A second source was the theory of enriched categories and Lawvere's unusual view of interesting mathematical structures as categories enriched over a suitable basis.